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Ms4a13 membrane-spanning 4-domains, subfamily A, member 13 [ Mus musculus (house mouse) ]

Gene ID: 73466, updated on 23-Jun-2021

Summary

Official Symbol
Ms4a13provided by MGI
Official Full Name
membrane-spanning 4-domains, subfamily A, member 13provided by MGI
Primary source
MGI:MGI:1920716
See related
Ensembl:ENSMUSG00000057240
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tetm4.2; 1700060E18Rik
Expression
Restricted expression toward testis adult (RPKM 36.1) See more
Orthologs
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Genomic context

See Ms4a13 in Genome Data Viewer
Location:
19; 19 A
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (11146782..11174101, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (11169418..11196737, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11243908..11271213, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene membrane-spanning 4-domains, subfamily A, member 20 Neighboring gene NS1-associated protein 1 pseudogene Neighboring gene membrane-spanning 4-domains, subfamily A, member 19 Neighboring gene RIKEN cDNA 4930526L06 gene Neighboring gene membrane-spanning 4-domains, subfamily A, member 12 Neighboring gene membrane-spanning 4-domains, subfamily A, member 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
membrane-spanning 4-domains subfamily A member 13
Names
testis-expressed transmembrane 4
testis-expressed transmembrane protein 4.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001347435.1NP_001334364.1  membrane-spanning 4-domains subfamily A member 13 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AF544402, AK006841
    Consensus CDS
    CCDS84420.1
    UniProtKB/Swiss-Prot
    Q5FWC3
    Related
    ENSMUSP00000140293.2, ENSMUST00000188464.2
  2. NM_198224.3NP_937867.2  membrane-spanning 4-domains subfamily A member 13 isoform 1

    See identical proteins and their annotated locations for NP_937867.2

    Status: VALIDATED

    Source sequence(s)
    AC134839, AC148321
    Consensus CDS
    CCDS29595.1
    UniProtKB/Swiss-Prot
    Q5FWC3
    Related
    ENSMUSP00000073095.7, ENSMUST00000073380.13
    Conserved Domains (1) summary
    pfam04103
    Location:15117
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    11146782..11174101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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