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LY6D lymphocyte antigen 6 family member D [ Pan troglodytes (chimpanzee) ]

Gene ID: 738803, updated on 29-Mar-2024

Summary

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Gene symbol
LY6D
Gene description
lymphocyte antigen 6 family member D
Locus tag
CK820_G0029217
See related
Ensembl:ENSPTRG00000020641
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See LY6D in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (153119186..153120946, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (157714568..157716328, complement)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene secreted LY6/PLAUR domain containing 2 Neighboring gene Ly6/neurotoxin 1 Neighboring gene glycosylphosphatidylinositol anchored molecule like Neighboring gene zinc finger HIT domain-containing protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lymphocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lymphocyte antigen 6D
Names
lymphocyte antigen 6 complex, locus D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    153119186..153120946 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001150525.4 → XP_001150525.3  lymphocyte antigen 6D

    UniProtKB/TrEMBL
    A0A2J8LFK8, A0A6D2XIQ3, H2QWT1
    Related
    ENSPTRP00000035296.4
    Conserved Domains (1) summary
    smart00134
    Location:53 → 130
    LU; Ly-6 antigen / uPA receptor -like domain
Nucleotide Protein
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