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TAMALIN trafficking regulator and scaffold protein tamalin [ Pan troglodytes (chimpanzee) ]

Gene ID: 739673, updated on 19-Mar-2021

Summary

Gene symbol
TAMALIN
Gene description
trafficking regulator and scaffold protein tamalin
Locus tag
CK820_G0039618
See related
Ensembl:ENSPTRG00000004965
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
GRASP
Orthologs
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Genomic context

See TAMALIN in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 12 NC_036891.1 (37086492..37095132, complement)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 12 NC_006479.4 (37825776..37834421, complement)

Chromosome 12 - NC_036891.1Genomic Context describing neighboring genes Neighboring gene autophagy related 101 Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene U6 spliceosomal RNA Neighboring gene activin A receptor type 1B Neighboring gene activin A receptor like type 1

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
general receptor for phosphoinositides 1-associated scaffold protein; LOW QUALITY PROTEIN: general receptor for phosphoinositides 1-associated scaffold protein
Names
general receptor for phosphoinositides 1 associated scaffold protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036891.1 Reference Clint_PTRv2 Primary Assembly

    Range
    37086492..37095132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016923358.2XP_016778847.2  LOW QUALITY PROTEIN: general receptor for phosphoinositides 1-associated scaffold protein

    Conserved Domains (1) summary
    cd00992
    Location:100185
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
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