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CXCL2 C-X-C motif chemokine ligand 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 740176, updated on 19-Mar-2021

Summary

Official Symbol
CXCL2provided by VGNC
Official Full Name
C-X-C motif chemokine ligand 2provided by VGNC
Primary source
VGNC:VGNC:8661
Locus tag
CK820_G0003489
See related
Ensembl:ENSPTRG00000016163
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CXCL1
Orthologs
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Genomic context

See CXCL2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 4 NC_036883.1 (55100232..55102479)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 4 NC_006471.4 (56404131..56406378)

Chromosome 4 - NC_036883.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107974290 Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like Neighboring gene uncharacterized LOC107974292 Neighboring gene uncharacterized LOC107974291 Neighboring gene coiled-coil domain-containing protein 90B, mitochondrial pseudogene Neighboring gene uncharacterized LOC107974293

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
C-X-C motif chemokine 2
Names
chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
chemokine (C-X-C motif) ligand 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036883.1 Reference Clint_PTRv2 Primary Assembly

    Range
    55100232..55102479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001155614.4XP_001155614.1  C-X-C motif chemokine 2

    See identical proteins and their annotated locations for XP_001155614.1

    UniProtKB/TrEMBL
    H2QPP0
    Related
    ENSPTRP00000027779.4, ENSPTRT00000030094.5
    Conserved Domains (1) summary
    cd00273
    Location:40102
    Chemokine_CXC; Chemokine_CXC: 1 of 4 subgroup designations based on the arrangement of the two N-terminal cysteine residues; includes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; many members ...
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