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Tex37 testis expressed 37 [ Mus musculus (house mouse) ]

Gene ID: 74221, updated on 23-Jun-2021

Summary

Official Symbol
Tex37provided by MGI
Official Full Name
testis expressed 37provided by MGI
Primary source
MGI:MGI:1921471
See related
Ensembl:ENSMUSG00000051896
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tsc21; 1700011F03Rik
Expression
Restricted expression toward testis adult (RPKM 105.0) See more
Orthologs
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Genomic context

See Tex37 in Genome Data Viewer
Location:
6; 6 C1
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (70890073..70928078, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (70913089..70951095, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (70863083..70868916, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30331 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 3 Neighboring gene predicted gene, 23346 Neighboring gene forkhead box I3 Neighboring gene small nucleolar RNA SNORA48

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (1)  1 citation

General gene information

Homology

Clone Names

  • MGC58753

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
testis-expressed sequence 37 protein
Names
protein TSC21
testis-specific conserved protein of 21 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355766.1NP_001342695.1  testis-expressed sequence 37 protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK005862
    Conserved Domains (1) summary
    pfam15217
    Location:1179
    TSC21; TSC21 family
  2. NM_028825.3NP_083101.1  testis-expressed sequence 37 protein isoform 1

    See identical proteins and their annotated locations for NP_083101.1

    Status: VALIDATED

    Source sequence(s)
    AK005862
    Consensus CDS
    CCDS20224.1
    UniProtKB/Swiss-Prot
    Q9DAG4
    Related
    ENSMUSP00000066786.5, ENSMUST00000063456.5
    Conserved Domains (1) summary
    pfam15217
    Location:1180
    TSC21; TSC21 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    70890073..70928078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030255637.2XP_030111497.1  testis-expressed sequence 37 protein isoform X2

    Conserved Domains (1) summary
    pfam15217
    Location:34213
    TSC21; TSC21 family
  2. XM_030255636.1XP_030111496.1  testis-expressed sequence 37 protein isoform X1

    Conserved Domains (1) summary
    pfam15217
    Location:1179
    TSC21; TSC21 family
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