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Armc1 armadillo repeat containing 1 [ Mus musculus (house mouse) ]

Gene ID: 74252, updated on 23-Jun-2021

Summary

Official Symbol
Armc1provided by MGI
Official Full Name
armadillo repeat containing 1provided by MGI
Primary source
MGI:MGI:1921502
See related
Ensembl:ENSMUSG00000027599
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A; Arcp; AA409258; AW048872; 2310016N05Rik; 2900046P06Rik; 3110009G21Rik; C330014L16Rik
Expression
Broad expression in CNS E18 (RPKM 11.8), bladder adult (RPKM 11.4) and 25 other tissues See more
Orthologs
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Genomic context

See Armc1 in Genome Data Viewer
Location:
3; 3 A2
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (19185566..19219225, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (19131402..19163095, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (19032144..19063065, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30789 Neighboring gene predicted gene, 30341 Neighboring gene mitochondrial fission regulator 1 Neighboring gene phosphodiesterase 7A Neighboring gene testis-specific gene A8 protein-like

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in intracellular distribution of mitochondria ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
armadillo repeat-containing protein 1
Names
armadillo repeat containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357689.1NP_001344618.1  armadillo repeat-containing protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC127283, BF464987
    Conserved Domains (1) summary
    smart00185
    Location:3267
    ARM; Armadillo/beta-catenin-like repeats
  2. NM_028840.3NP_083116.1  armadillo repeat-containing protein 1 isoform 1

    See identical proteins and their annotated locations for NP_083116.1

    Status: VALIDATED

    Source sequence(s)
    AC127283, AK034483, AK082783, BF464987, BY165551
    Consensus CDS
    CCDS17255.1
    UniProtKB/Swiss-Prot
    Q9D7A8
    Related
    ENSMUSP00000029125.9, ENSMUST00000029125.10
    Conserved Domains (1) summary
    pfam00514
    Location:2767
    Arm; Armadillo/beta-catenin-like repeat

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    19185566..19219225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030252846.2XP_030108706.1  armadillo repeat-containing protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00514
    Location:2767
    Arm; Armadillo/beta-catenin-like repeat
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