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TNC tenascin C [ Pan troglodytes (chimpanzee) ]

Gene ID: 742736, updated on 29-Mar-2024

Summary

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Official Symbol
TNCprovided by VGNC
Official Full Name
tenascin Cprovided by VGNC
Primary source
VGNC:VGNC:4885
Locus tag
CK820_G0012487
See related
Ensembl:ENSPTRG00000021294
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (23328354..23425569)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (95443151..95540459, complement)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129136081 Neighboring gene uncharacterized LOC104007990 Neighboring gene uncharacterized LOC134807633 Neighboring gene TNF superfamily member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perisynaptic extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tenascin
Names
tenascin C (hexabrachion)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    23328354..23425569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063787538.1 → XP_063643608.1  tenascin isoform X1

  2. XM_009457162.5 → XP_009455437.4  tenascin isoform X4

  3. XM_001156720.7 → XP_001156720.2  tenascin isoform X7

  4. XM_009457165.4 → XP_009455440.2  tenascin isoform X10

  5. XM_063787542.1 → XP_063643612.1  tenascin isoform X5

  6. XM_063787546.1 → XP_063643616.1  tenascin isoform X11

  7. XM_063787541.1 → XP_063643611.1  tenascin isoform X3

  8. XM_063787545.1 → XP_063643615.1  tenascin isoform X9

  9. XM_063787540.1 → XP_063643610.1  tenascin isoform X2

  10. XM_063787543.1 → XP_063643613.1  tenascin isoform X6

  11. XM_063787544.1 → XP_063643614.1  tenascin isoform X8

Nucleotide Protein
Heading Accession and Version

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Research Materials
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