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Plpp6 phospholipid phosphatase 6 [ Mus musculus (house mouse) ]

Gene ID: 74411, updated on 23-Jun-2021

Summary

Official Symbol
Plpp6provided by MGI
Official Full Name
phospholipid phosphatase 6provided by MGI
Primary source
MGI:MGI:1921661
See related
Ensembl:ENSMUSG00000040105
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ppa; Ppapdc2; 4932443D16Rik
Orthologs
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Genomic context

See Plpp6 in Genome Data Viewer
Location:
19; 19 C1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (28941320..28944201)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (28963920..28966801)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (29038410..29041291)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 52404 Neighboring gene solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene Neighboring gene spermatogenesis associated 6 like Neighboring gene phytanoyl-CoA hydroxylase pseudogene Neighboring gene tektin 5 pseudogene

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables lipid phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
enables sphingosine-1-phosphate phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in phospholipid dephosphorylation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
phospholipid phosphatase 6
Names
phosphatidic acid phosphatase type 2 domain containing 2
phosphatidic acid phosphatase type 2 domain-containing protein 2
presqualene diphosphate phosphatase
NP_083198.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028922.3NP_083198.1  phospholipid phosphatase 6

    See identical proteins and their annotated locations for NP_083198.1

    Status: VALIDATED

    Source sequence(s)
    AK016572, AK149181, BC052412
    Consensus CDS
    CCDS29728.1
    UniProtKB/Swiss-Prot
    Q9D4F2
    Related
    ENSMUSP00000047776.3, ENSMUST00000045674.4
    Conserved Domains (2) summary
    COG0671
    Location:204266
    PgpB; Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]
    cd03391
    Location:115273
    PAP2_containing_2_like; PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    28941320..28944201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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