Format

Send to:

Choose Destination

Ifitm7 interferon induced transmembrane protein 7 [ Mus musculus (house mouse) ]

Gene ID: 74482, updated on 24-Jul-2021

Summary

Official Symbol
Ifitm7provided by MGI
Official Full Name
interferon induced transmembrane protein 7provided by MGI
Primary source
MGI:MGI:1921732
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mi; Mil4; 4933438K12Rik
Expression
Biased expression in testis adult (RPKM 36.3), CNS E18 (RPKM 10.7) and 5 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Ifitm7 in Genome Data Viewer
Location:
16; 16 A1
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (13799566..13804731, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (13981702..13986867, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (13982892..13984714, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene pyridoxal-dependent decarboxylase domain containing 1 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene Neighboring gene Mpv17 transgene, kidney disease mutant-like Neighboring gene laminin, gamma 1 pseudogene Neighboring gene bMERB domain containing 1 Neighboring gene aldo-keto reductase family 1, member B8 pseudogene Neighboring gene high mobility group nucleosome-binding domain-containing protein 5-like

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in cellular response to interferon-beta ISO
Inferred from Sequence Orthology
more info
 
involved_in defense response to virus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in negative regulation of viral entry into host cell IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in negative regulation of viral entry into host cell ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of viral genome replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in negative regulation of viral genome replication ISO
Inferred from Sequence Orthology
more info
 
involved_in response to interferon-alpha IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in response to interferon-alpha ISO
Inferred from Sequence Orthology
more info
 
involved_in response to interferon-beta IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in response to interferon-beta ISO
Inferred from Sequence Orthology
more info
 
involved_in response to interferon-gamma IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in response to interferon-gamma ISO
Inferred from Sequence Orthology
more info
 
involved_in response to virus ISO
Inferred from Sequence Orthology
more info
 
involved_in type I interferon signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in early endosome membrane ISO
Inferred from Sequence Orthology
more info
 
located_in late endosome membrane ISO
Inferred from Sequence Orthology
more info
 
located_in lysosomal membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
interferon induced transmembrane protein 7
Names
interferon induced transmembrane protein 4 like
interferon induced transmembrane protein like 4

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001270718.1NP_001257647.1  interferon induced transmembrane protein 7

    See identical proteins and their annotated locations for NP_001257647.1

    Status: VALIDATED

    Source sequence(s)
    AK076846
    UniProtKB/TrEMBL
    Q8BVR2
    Conserved Domains (1) summary
    pfam04505
    Location:2898
    CD225; Interferon-induced transmembrane protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    13799566..13804731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001110161.1: Suppressed sequence

    Description
    NM_001110161.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein
  2. NM_028968.2: Suppressed sequence

    Description
    NM_028968.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript, which includes a large amount of intronic and repetitive sequence.
Support Center