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SYDE1 synapse defective Rho GTPase homolog 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 747974, updated on 19-Mar-2021

Summary

Official Symbol
SYDE1provided by VGNC
Official Full Name
synapse defective Rho GTPase homolog 1provided by VGNC
Primary source
VGNC:VGNC:10271
Locus tag
CK820_G0026262
See related
Ensembl:ENSPTRG00000010613
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See SYDE1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 19 NC_036898.1 (15677694..15685297)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 19 NC_006486.4 (16065002..16072607)

Chromosome 19 - NC_036898.1Genomic Context describing neighboring genes Neighboring gene caspase 14 Neighboring gene olfactory receptor 1I1 Neighboring gene ilvB acetolactate synthase like Neighboring gene U6 spliceosomal RNA Neighboring gene notch receptor 3

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
rho GTPase-activating protein SYDE1
Names
synapse defective 1, Rho GTPase, homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036898.1 Reference Clint_PTRv2 Primary Assembly

    Range
    15677694..15685297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003316162.4XP_003316210.1  rho GTPase-activating protein SYDE1

    See identical proteins and their annotated locations for XP_003316210.1

    UniProtKB/TrEMBL
    H2QFL6
    Related
    ENSPTRP00000018111.4, ENSPTRT00000019574.5
    Conserved Domains (1) summary
    cl02570
    Location:396601
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
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