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SYNPCC7942_RS07290 carbon dioxide-concentrating mechanism protein CcmK [ Synechococcus elongatus PCC 7942 = FACHB-805 ]

Gene ID: 76400166, updated on 11-Apr-2024

Summary

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Gene symbol
SYNPCC7942_RS07290
Gene description
carbon dioxide-concentrating mechanism protein CcmK
Locus tag
SYNPCC7942_RS07290
Gene type
protein coding
Organism
Synechococcus elongatus PCC 7942 = FACHB-805 (strain: PCC 7942)
Lineage
Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae; Synechococcus
Old locus tag
Synpcc7942_1425
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Genomic context

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Sequence:
NC_007604.1 (1478240..1479070)

NC_007604.1Genomic Context describing neighboring genes Neighboring gene ribulose bisphosphate carboxylase small subunit Neighboring gene hypothetical protein Neighboring gene form I ribulose bisphosphate carboxylase large subunit Neighboring gene ribulose bisphosphate carboxylase small subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007604.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Inactivation of ccmO in Synechococcus sp. Strain PCC 7942 Results in a Mutant Requiring High Levels of CO(2). Marco E, et al. Appl Environ Microbiol, 1994 Mar. PMID 16349207, Free PMC Article
  2. The 5'-flanking region of the gene encoding the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase is crucial for growth of the cyanobacterium Synechococcus sp. strain PCC 7942 at the level of CO2 in air. Friedberg D, et al. J Bacteriol, 1989 Nov. PMID 2509426, Free PMC Article
  3. Analysis of a genomic DNA region from the cyanobacterium Synechococcus sp. strain PCC7942 involved in carboxysome assembly and function. Price GD, et al. J Bacteriol, 1993 May. PMID 8491708, Free PMC Article
  4. Biogenesis of a bacterial organelle: the carboxysome assembly pathway. Cameron JC, et al. Cell, 2013 Nov 21. PMID 24267892
  5. Structural determinants of the outer shell of β-carboxysomes in Synechococcus elongatus PCC 7942: roles for CcmK2, K3-K4, CcmO, and CcmL. Rae BD, et al. PLoS One, 2012. PMID 22928045, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
carbon dioxide-concentrating mechanism protein CcmK

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007604.1 Reference assembly

    Range
    1478240..1479070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011242445.1 carbon dioxide-concentrating mechanism protein CcmK [Synechococcus elongatus]

    See identical proteins and their annotated locations for WP_011242445.1

    UniProtKB/Swiss-Prot
    P23655, P23656, P46205, Q31NB4, Q5N5U7
    Conserved Domains (2) summary
    cd07057
    Location:16 → 101
    BMC_CcmK; Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BCM) domain
    COG4577
    Location:16 → 162
    CcmK; Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN [Secondary metabolites biosynthesis, transport and catabolism, Energy production and conversion]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P46205.2