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Tmem101 transmembrane protein 101 [ Mus musculus (house mouse) ]

Gene ID: 76547, updated on 5-Mar-2024

Summary

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Official Symbol
Tmem101provided by MGI
Official Full Name
transmembrane protein 101provided by MGI
Primary source
MGI:MGI:1923797
See related
Ensembl:ENSMUSG00000020921 AllianceGenome:MGI:1923797
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2610511E22Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in genitourinary system. Orthologous to human TMEM101 (transmembrane protein 101). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in ovary adult (RPKM 15.2), limb E14.5 (RPKM 12.4) and 28 other tissues See more
Orthologs
human all
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Genomic context

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See Tmem101 in Genome Data Viewer
Location:
11 D; 11 65.52 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (102043372..102047245, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (102152546..102156422, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39394 Neighboring gene Ppih pseudogene Neighboring gene predicted gene 11586 Neighboring gene N-acetylglutamate synthase Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:102017679-102017862 Neighboring gene LSM12 homolog Neighboring gene STARR-positive B cell enhancer ABC_E10715 Neighboring gene glucose 6 phosphatase, catalytic, 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. GUDMAP: the genitourinary developmental molecular anatomy project. McMahon AP, et al. J Am Soc Nephrol, 2008 Apr. PMID 18287559
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 101

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029649.2 → NP_083925.2  transmembrane protein 101

    See identical proteins and their annotated locations for NP_083925.2

    Status: VALIDATED

    Source sequence(s)
    AK041154, AK140260
    Consensus CDS
    CCDS25489.1
    UniProtKB/Swiss-Prot
    Q91VP7, Q9CZW0
    Related
    ENSMUSP00000021296.7, ENSMUST00000021296.7
    Conserved Domains (1) summary
    pfam15111
    Location:8 → 256
    TMEM101; TMEM101 protein family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    102043372..102047245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017314829.3 → XP_017170318.1  transmembrane protein 101 isoform X1

    Conserved Domains (1) summary
    pfam15111
    Location:1 → 198
    TMEM101; TMEM101 protein family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q91VP7.1 GenPept UniProtKB/Swiss-Prot:Q91VP7

Gene LinkOut

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