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Fam81a family with sequence similarity 81, member A [ Mus musculus (house mouse) ]

Gene ID: 76886, updated on 26-Jun-2021

Summary

Official Symbol
Fam81aprovided by MGI
Official Full Name
family with sequence similarity 81, member Aprovided by MGI
Primary source
MGI:MGI:1924136
See related
Ensembl:ENSMUSG00000032224
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
6430514L14Rik
Expression
Biased expression in cortex adult (RPKM 31.1), frontal lobe adult (RPKM 29.8) and 4 other tissues See more
Orthologs
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Genomic context

See Fam81a in Genome Data Viewer
Location:
9; 9 D
Exon count:
10
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (69996586..70049840, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (70089304..70142558, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (69937117..69989364, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene glucosaminyl (N-acetyl) transferase 3, mucin type Neighboring gene predicted gene, 39369 Neighboring gene predicted gene, 39476 Neighboring gene predicted gene, 24257 Neighboring gene predicted gene, 26849 Neighboring gene myosin IE

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029784.2NP_084060.1  protein FAM81A

    See identical proteins and their annotated locations for NP_084060.1

    Status: PROVISIONAL

    Source sequence(s)
    AC157950
    Consensus CDS
    CCDS40679.1
    UniProtKB/Swiss-Prot
    Q3UXZ6
    Related
    ENSMUSP00000034749.9, ENSMUST00000034749.16
    Conserved Domains (1) summary
    COG1196
    Location:76317
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    69996586..70049840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030244712.1XP_030100572.1  protein FAM81A isoform X2

    Conserved Domains (1) summary
    COG1196
    Location:68309
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
  2. XM_006511551.4XP_006511614.1  protein FAM81A isoform X1

    See identical proteins and their annotated locations for XP_006511614.1

    UniProtKB/Swiss-Prot
    Q3UXZ6
    Conserved Domains (1) summary
    COG1196
    Location:76317
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
  3. XM_006511550.5XP_006511613.1  protein FAM81A isoform X1

    See identical proteins and their annotated locations for XP_006511613.1

    UniProtKB/Swiss-Prot
    Q3UXZ6
    Conserved Domains (1) summary
    COG1196
    Location:76317
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
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