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ZNF131 zinc finger protein 131 [ Homo sapiens (human) ]

Gene ID: 7690, updated on 7-Apr-2024

Summary

Official Symbol
ZNF131provided by HGNC
Official Full Name
zinc finger protein 131provided by HGNC
Primary source
HGNC:HGNC:12915
See related
Ensembl:ENSG00000172262 MIM:604073; AllianceGenome:HGNC:12915
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZBTB35; pHZ-10
Summary
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Located in intermediate filament cytoskeleton and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis (RPKM 10.2), bone marrow (RPKM 5.2) and 25 other tissues See more
Orthologs
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Genomic context

See ZNF131 in Genome Data Viewer
Location:
5p12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (43120914..43176324)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (43373818..43429219)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (43121016..43176426)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ANXA2R overlapping transcript 1 Neighboring gene uncharacterized LOC100132356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22532 Neighboring gene uncharacterized LOC100506639 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43073915-43074416 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43074417-43074916 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:43078210-43078763 Neighboring gene uncharacterized LOC124900972 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22533 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22534 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15990 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43121535-43122103 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43122104-43122671 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15992 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:43192643-43193352 Neighboring gene spermine synthase pseudogene Neighboring gene NIM1 serine/threonine protein kinase Neighboring gene tubulin alpha pseudogene 14

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
EBI GWAS Catalog

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of cytokine production IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of immune system process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in intermediate filament cytoskeleton IDA
Inferred from Direct Assay
more info
 
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 
located_in nucleoplasm TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
zinc finger protein 131
Names
zinc finger and BTB domain containing 35
zinc finger protein 131 (clone pHZ-10)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001297548.3NP_001284477.1  zinc finger protein 131 isoform 1

    See identical proteins and their annotated locations for NP_001284477.1

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS78005.1
    UniProtKB/Swiss-Prot
    B4DRL3, P52739, Q6PIF0
    UniProtKB/TrEMBL
    B3KQ42
    Related
    ENSP00000426504.1, ENST00000509156.5
    Conserved Domains (6) summary
    smart00225
    Location:35122
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:262444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:290311
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:422439
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:24122
    BTB; BTB/POZ domain
    pfam13465
    Location:342367
    zf-H2C2_2; Zinc-finger double domain
  2. NM_001330704.2NP_001317633.1  zinc finger protein 131 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC106800
  3. NM_001330705.1NP_001317634.1  zinc finger protein 131 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC106800
  4. NM_001330706.2NP_001317635.1  zinc finger protein 131 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS43313.1
    UniProtKB/TrEMBL
    B3KQ42
    Conserved Domains (4) summary
    sd00017
    Location:256277
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:388405
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:308333
    zf-H2C2_2; Zinc-finger double domain
  5. NM_001330707.2NP_001317636.1  zinc finger protein 131 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS78005.1
    UniProtKB/Swiss-Prot
    B4DRL3, P52739, Q6PIF0
    UniProtKB/TrEMBL
    B3KQ42
    Related
    ENSP00000507111.1, ENST00000682664.1
    Conserved Domains (6) summary
    smart00225
    Location:35122
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:262444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:290311
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:422439
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:24122
    BTB; BTB/POZ domain
    pfam13465
    Location:342367
    zf-H2C2_2; Zinc-finger double domain
  6. NM_001330708.2NP_001317637.1  zinc finger protein 131 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS78005.1
    UniProtKB/Swiss-Prot
    B4DRL3, P52739, Q6PIF0
    UniProtKB/TrEMBL
    B3KQ42
    Conserved Domains (6) summary
    smart00225
    Location:35122
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:262444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:290311
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:422439
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:24122
    BTB; BTB/POZ domain
    pfam13465
    Location:342367
    zf-H2C2_2; Zinc-finger double domain
  7. NM_001330709.2NP_001317638.1  zinc finger protein 131 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC106800
  8. NM_001330710.2NP_001317639.1  zinc finger protein 131 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC106800
  9. NM_001330711.2NP_001317640.1  zinc finger protein 131 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS43313.1
    UniProtKB/TrEMBL
    B3KQ42
    Conserved Domains (4) summary
    sd00017
    Location:256277
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:388405
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:308333
    zf-H2C2_2; Zinc-finger double domain
  10. NM_001330712.2NP_001317641.1  zinc finger protein 131 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS78005.1
    UniProtKB/Swiss-Prot
    B4DRL3, P52739, Q6PIF0
    UniProtKB/TrEMBL
    B3KQ42
    Conserved Domains (6) summary
    smart00225
    Location:35122
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:262444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:290311
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:422439
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:24122
    BTB; BTB/POZ domain
    pfam13465
    Location:342367
    zf-H2C2_2; Zinc-finger double domain
  11. NM_001330713.2NP_001317642.1  zinc finger protein 131 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS43313.1
    UniProtKB/TrEMBL
    B3KQ42
    Related
    ENSP00000423945.1, ENST00000505606.6
    Conserved Domains (4) summary
    sd00017
    Location:256277
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:388405
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:308333
    zf-H2C2_2; Zinc-finger double domain
  12. NM_001330714.2NP_001317643.1  zinc finger protein 131 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS78005.1
    UniProtKB/Swiss-Prot
    B4DRL3, P52739, Q6PIF0
    UniProtKB/TrEMBL
    B3KQ42
    Conserved Domains (6) summary
    smart00225
    Location:35122
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:262444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:290311
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:422439
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:24122
    BTB; BTB/POZ domain
    pfam13465
    Location:342367
    zf-H2C2_2; Zinc-finger double domain
  13. NM_001330715.2NP_001317644.1  zinc finger protein 131 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS43313.1
    UniProtKB/TrEMBL
    B3KQ42
    Conserved Domains (4) summary
    sd00017
    Location:256277
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:388405
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:308333
    zf-H2C2_2; Zinc-finger double domain
  14. NM_001330716.2NP_001317645.1  zinc finger protein 131 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC106800
    UniProtKB/TrEMBL
    B3KQ42
  15. NM_001330717.2NP_001317646.1  zinc finger protein 131 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC106800
    UniProtKB/TrEMBL
    B3KQ42
    Conserved Domains (4) summary
    COG5048
    Location:167331
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:177198
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:309326
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:229254
    zf-H2C2_2; Zinc-finger double domain
  16. NM_001388319.1NP_001375248.1  zinc finger protein 131 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS43313.1
    UniProtKB/TrEMBL
    B3KQ42
    Related
    ENSP00000421246.1, ENST00000509634.5
    Conserved Domains (4) summary
    sd00017
    Location:256277
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:388405
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:308333
    zf-H2C2_2; Zinc-finger double domain
  17. NM_003432.4NP_003423.1  zinc finger protein 131 isoform 2

    See identical proteins and their annotated locations for NP_003423.1

    Status: VALIDATED

    Source sequence(s)
    AC106800
    Consensus CDS
    CCDS43313.1
    UniProtKB/TrEMBL
    B3KQ42
    Related
    ENSP00000305804.4, ENST00000306938.8
    Conserved Domains (4) summary
    sd00017
    Location:256277
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:388405
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:308333
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    43120914..43176324
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    43373818..43429219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)