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Tsacc TSSK6 activating co-chaperone [ Mus musculus (house mouse) ]

Gene ID: 76927, updated on 23-Jun-2021

Summary

Official Symbol
Tsaccprovided by MGI
Official Full Name
TSSK6 activating co-chaperoneprovided by MGI
Primary source
MGI:MGI:1924177
See related
Ensembl:ENSMUSG00000010538
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SIP; 1700021C14Rik
Expression
Biased expression in testis adult (RPKM 186.4) and genital fat pad adult (RPKM 3.2) See more
Orthologs
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Genomic context

See Tsacc in Genome Data Viewer
Location:
3; 3 F1
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (88190059..88204306, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (88282752..88296999, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (88086682..88100760, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene VISTA enhancer mm474 Neighboring gene Rhesus blood group-associated B glycoprotein Neighboring gene chaperonin containing Tcp1, subunit 3 (gamma) Neighboring gene glycosylated lysosomal membrane protein

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

General gene information

Homology

Clone Names

  • MGC130252

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables Hsp70 protein binding ISO
Inferred from Sequence Orthology
more info
 
enables chaperone binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables chaperone binding ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of protein kinase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
TSSK6-activating co-chaperone protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357024.1NP_001343953.1  TSSK6-activating co-chaperone protein

    Status: VALIDATED

    Source sequence(s)
    AC044864, BF152860
    Consensus CDS
    CCDS17467.1
    Related
    ENSMUSP00000103180.4, ENSMUST00000107556.10
    Conserved Domains (1) summary
    pfam15836
    Location:1124
    SSTK-IP; SSTK-interacting protein, TSSK6-activating co-chaperone protein
  2. NM_029801.3NP_084077.1  TSSK6-activating co-chaperone protein

    See identical proteins and their annotated locations for NP_084077.1

    Status: VALIDATED

    Source sequence(s)
    AC044864, AK006195
    Consensus CDS
    CCDS17467.1
    UniProtKB/Swiss-Prot
    Q9DA44
    Related
    ENSMUSP00000010682.4, ENSMUST00000010682.4
    Conserved Domains (1) summary
    pfam15836
    Location:1124
    SSTK-IP; SSTK-interacting protein, TSSK6-activating co-chaperone protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    88190059..88204306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030252882.2XP_030108742.1  TSSK6-activating co-chaperone protein isoform X1

    Conserved Domains (1) summary
    pfam15836
    Location:1149
    SSTK-IP; SSTK-interacting protein, TSSK6-activating co-chaperone protein
  2. XM_030252883.2XP_030108743.1  TSSK6-activating co-chaperone protein isoform X2

    Conserved Domains (1) summary
    pfam15836
    Location:29146
    SSTK-IP; SSTK-interacting protein, TSSK6-activating co-chaperone protein
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