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TSPAN18 tetraspanin 18 [ Bos taurus (cattle) ]

Gene ID: 783765, updated on 5-Mar-2024

Summary

Official Symbol
TSPAN18provided by VGNC
Official Full Name
tetraspanin 18provided by VGNC
Primary source
VGNC:VGNC:36433
See related
BGD:BT14443; Ensembl:ENSBTAG00000021484
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 15
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (74788741..75004308)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA61 Neighboring gene uncharacterized LOC112441654 Neighboring gene CD82 molecule Neighboring gene tumor protein p53 inducible protein 11 Neighboring gene PR/SET domain 11 Neighboring gene synaptotagmin 13

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

General protein information

Preferred Names
tetraspanin-18
Names
tetraspanin similiar to uroplakin 1
tspan-18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080920.1NP_001074389.1  tetraspanin-18

    See identical proteins and their annotated locations for NP_001074389.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021809
    UniProtKB/Swiss-Prot
    Q58CY8
    Related
    ENSBTAP00000028636.5, ENSBTAT00000028636.5
    Conserved Domains (1) summary
    cd03156
    Location:105218
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    74788741..75004308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059875002.1XP_059730985.1  tetraspanin-18 isoform X1

  2. XM_024975564.2XP_024831332.1  tetraspanin-18 isoform X1

    Related
    ENSBTAP00000080109.1, ENSBTAT00000100490.1
    Conserved Domains (1) summary
    cd03156
    Location:184297
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
  3. XM_024975566.2XP_024831334.1  tetraspanin-18 isoform X2

    Conserved Domains (1) summary
    cd03156
    Location:184284
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
  4. XM_024975569.2XP_024831337.1  tetraspanin-18 isoform X3

    UniProtKB/Swiss-Prot
    Q58CY8
    Conserved Domains (1) summary
    cd03156
    Location:105218
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
  5. XM_059875003.1XP_059730986.1  tetraspanin-18 isoform X3

    UniProtKB/Swiss-Prot
    Q58CY8
  6. XM_059875005.1XP_059730988.1  tetraspanin-18 isoform X3

    UniProtKB/Swiss-Prot
    Q58CY8
  7. XM_059875004.1XP_059730987.1  tetraspanin-18 isoform X3

    UniProtKB/Swiss-Prot
    Q58CY8