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2700046A07Rik RIKEN cDNA 2700046A07 gene [ Mus musculus (house mouse) ]

Gene ID: 78449, updated on 23-Jun-2021

Summary

Official Symbol
2700046A07Rikprovided by MGI
Official Full Name
RIKEN cDNA 2700046A07 geneprovided by MGI
Primary source
MGI:MGI:1919803
See related
Ensembl:ENSMUSG00000041789
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A330042I05Rik
Expression
Biased expression in CNS E11.5 (RPKM 1.6), frontal lobe adult (RPKM 0.8) and 11 other tissues See more
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Genomic context

See 2700046A07Rik in Genome Data Viewer
Location:
18; 18 E1
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (62884745..62889418, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (62751674..62756347, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (62911328..62915969, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor, Kazal type 10 Neighboring gene serine peptidase inhibitor, Kazal type 13 Neighboring gene predicted gene, 41751 Neighboring gene branched chain ketoacid dehydrogenase E1, alpha polypeptide pseudogene Neighboring gene predicted gene, 36598 Neighboring gene predicted gene, 41752 Neighboring gene adenomatosis polyposis coli down-regulated 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037693.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC127353, BC072581, CJ067024
    Related
    ENSMUST00000067450.3

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    62884745..62889418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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