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ASCL3 achaete-scute family bHLH transcription factor 3 [ Bos taurus (cattle) ]

Gene ID: 786757, updated on 5-Mar-2024

Summary

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Official Symbol
ASCL3provided by VGNC
Official Full Name
achaete-scute family bHLH transcription factor 3provided by VGNC
Primary source
VGNC:VGNC:54856
See related
Ensembl:ENSBTAG00000032339
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
ASCL3-like
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (43652345..43657088)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene TMEM9 domain family member B Neighboring gene small ubiquitin-related modifier 3 Neighboring gene chromosome 15 C11orf16 homolog Neighboring gene A-kinase interacting protein 1 Neighboring gene DENN domain containing 2B Neighboring gene uncharacterized LOC112441629

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
achaete-scute homolog 3
Names
achaete-scute complex homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    43652345..43657088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015474702.3 → XP_015330188.1  achaete-scute homolog 3

    UniProtKB/TrEMBL
    F1MG89
    Related
    ENSBTAP00000043229.4, ENSBTAT00000045877.4
    Conserved Domains (1) summary
    pfam00010
    Location:96 → 146
    HLH; Helix-loop-helix DNA-binding domain
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials
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