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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001042565.3 → NP_001036030.1 WD repeat and SOCS box-containing protein 1 isoform 2
See identical proteins and their annotated locations for NP_001036030.1
Status: VALIDATED
- Source sequence(s)
-
AI644176, AK048511, BG069536
- UniProtKB/TrEMBL
- Q8C841, Q8VE81
- Related
-
ENSMUST00000150416.8
- Conserved Domains (3) summary
-
- sd00039
Location:17 → 57
- 7WD40; WD40 repeat [structural motif]
- cl02533
Location:140 → 178
- SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
- cl29593
Location:1 → 146
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_019653.3 → NP_062627.3 WD repeat and SOCS box-containing protein 1 isoform 1
See identical proteins and their annotated locations for NP_062627.3
Status: VALIDATED
- Source sequence(s)
-
AK167394, BB431254, BY097910
- Consensus CDS
-
CCDS25118.1
- UniProtKB/Swiss-Prot
-
O54927
- UniProtKB/TrEMBL
- Q3TFQ2, Q3TIA1, Q3U7R9, Q7TMU2
- Related
- ENSMUSP00000017821.6, ENSMUST00000017821.12
- Conserved Domains (4) summary
-
- COG2319
Location:139 → 382
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:135 → 388
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:174 → 212
- 7WD40; WD40 repeat [structural motif]
- cl02533
Location:382 → 420
- SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
79130208..79145521 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036157103.1 → XP_036012996.1 WD repeat and SOCS box-containing protein 1 isoform X1
- UniProtKB/TrEMBL
- Q8C841, Q8VE81
- Conserved Domains (3) summary
-
- sd00039
Location:17 → 57
- 7WD40; WD40 repeat [structural motif]
- cl02533
Location:140 → 178
- SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
- cl29593
Location:1 → 146
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...