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cst14a.2 cystatin 14a, tandem duplicate 2 [ Danio rerio (zebrafish) ]

Gene ID: 792225, updated on 16-Oct-2021

Summary

Official Symbol
cst14a.2provided by ZNC
Official Full Name
cystatin 14a, tandem duplicate 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1065
See related
Ensembl:ENSDARG00000045352
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:56530
Orthologs
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Genomic context

See cst14a.2 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (20920579..20921712)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (20776160..20777293)
103 previous assembly Zv9 (GCF_000002035.4) 24 NC_007135.5 (21529031..21530164)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene si:ch211-161h7.5 Neighboring gene cystatin 14a, tandem duplicate 1 Neighboring gene mitochondrial matrix import factor 23 Neighboring gene family with sequence similarity 162 member A

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Homology

Clone Names

  • MGC56530, MGC174082

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
cystatin 14a, tandem duplicate 2
Names
cst14a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001103129.1NP_001096599.1  cystatin 14a, tandem duplicate 2

    See identical proteins and their annotated locations for NP_001096599.1

    Status: PROVISIONAL

    Source sequence(s)
    BC152228
    UniProtKB/TrEMBL
    A7MCL7
    Related
    ENSDARP00000032643.6, ENSDART00000037224.7
    Conserved Domains (1) summary
    pfam00031
    Location:677
    Cystatin; Cystatin domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    20920579..20921712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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