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LOC8041162 akirin-2 [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8041162, updated on 26-Mar-2024

Summary

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Gene symbol
LOC8041162
Gene description
akirin-2
See related
VectorBase:ISCP_033797; EnsemblRapid:LOC8041162
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
Also known as
subolesin
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Genomic context

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See LOC8041162 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609857.1 (93099438..93128709, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024388743.1 (577491..599903, complement)

NW_024609857.1Genomic Context describing neighboring genes Neighboring gene unconventional myosin-VI Neighboring gene adrenodoxin-like protein 2, mitochondrial Neighboring gene activating signal cointegrator 1 complex subunit 3 Neighboring gene cell division cycle 5-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Autocidal control of ticks by silencing of a single gene by RNA interference. de la Fuente J, et al. Biochem Biophys Res Commun, 2006 May 26. PMID 16630571
  2. The tick protective antigen, 4D8, is a conserved protein involved in modulation of tick blood ingestion and reproduction. de la Fuente J, et al. Vaccine, 2006 May 8. PMID 16580098
  3. Vaccination with recombinant tick antigens for the control of Ixodes scapularis adult infestations. Almazán C, et al. Vaccine, 2005 Nov 16. PMID 16153760
  4. Synergistic effect of silencing the expression of tick protective antigens 4D8 and Rs86 in Rhipicephalus sanguineus by RNA interference. de la Fuente J, et al. Parasitol Res, 2006 Jul. PMID 16518610
  5. Characterization of three Ixodes scapularis cDNAs protective against tick infestations. Almazán C, et al. Vaccine, 2005 Aug 15. PMID 16005748

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
akirin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609857.1 Reference ASM1692078v2

    Range
    93099438..93128709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002414448.5 → XP_002414493.1  akirin-2

    See identical proteins and their annotated locations for XP_002414493.1

    UniProtKB/TrEMBL
    Q4VRW2, S4U8C9, S4U9E5, S4UF09
    Related
    XP_002414493.1, XM_002414448.5
Nucleotide Protein
Heading Accession and Version

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