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Maged2 MAGE family member D2 [ Mus musculus (house mouse) ]

Gene ID: 80884, updated on 23-Jun-2021

Summary

Official Symbol
Maged2provided by MGI
Official Full Name
MAGE family member D2provided by MGI
Primary source
MGI:MGI:1933391
See related
Ensembl:ENSMUSG00000025268
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ORF1; Mage-d; Mage-d2; 4833439A22Rik
Expression
Broad expression in limb E14.5 (RPKM 115.6), placenta adult (RPKM 69.2) and 21 other tissues See more
Orthologs
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Genomic context

See Maged2 in Genome Data Viewer
Location:
X; X F3
Exon count:
16
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (149589417..149597358, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (150806421..150814362, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (147240964..147248825, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 33991 Neighboring gene predicted gene, 18773 Neighboring gene predicted gene, 24907 Neighboring gene inter-alpha (globulin) inhibitor H5-like, pseudogene Neighboring gene predicted gene, 54086 Neighboring gene polypyrimidine tract binding protein 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in female pregnancy ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in renal sodium ion absorption ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
melanoma-associated antigen D2
Names
melanoma antigen, family D, 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199246.2NP_001186175.1  melanoma-associated antigen D2

    See identical proteins and their annotated locations for NP_001186175.1

    Status: VALIDATED

    Source sequence(s)
    BB869272, BC058581
    Consensus CDS
    CCDS30466.1
    UniProtKB/TrEMBL
    Q9ER67
    Related
    ENSMUSP00000108320.2, ENSMUST00000112700.8
    Conserved Domains (3) summary
    PRK13335
    Location:32125
    PRK13335; superantigen-like protein SSL3; Reviewed
    PRK13914
    Location:33224
    PRK13914; invasion associated endopeptidase
    pfam01454
    Location:286454
    MAGE; MAGE family
  2. NM_001358566.1NP_001345495.1  melanoma-associated antigen D2

    Status: VALIDATED

    Source sequence(s)
    AL672282
    Consensus CDS
    CCDS30466.1
    Conserved Domains (3) summary
    PRK13335
    Location:32125
    PRK13335; superantigen-like protein SSL3; Reviewed
    PRK13914
    Location:33224
    PRK13914; invasion associated endopeptidase
    pfam01454
    Location:286454
    MAGE; MAGE family
  3. NM_001358567.1NP_001345496.1  melanoma-associated antigen D2

    Status: VALIDATED

    Source sequence(s)
    AL672282
    Consensus CDS
    CCDS30466.1
    Conserved Domains (3) summary
    PRK13335
    Location:32125
    PRK13335; superantigen-like protein SSL3; Reviewed
    PRK13914
    Location:33224
    PRK13914; invasion associated endopeptidase
    pfam01454
    Location:286454
    MAGE; MAGE family
  4. NM_001358568.1NP_001345497.1  melanoma-associated antigen D2

    Status: VALIDATED

    Source sequence(s)
    AL672282
    Consensus CDS
    CCDS30466.1
    Related
    ENSMUSP00000108317.4, ENSMUST00000112697.10
    Conserved Domains (3) summary
    PRK13335
    Location:32125
    PRK13335; superantigen-like protein SSL3; Reviewed
    PRK13914
    Location:33224
    PRK13914; invasion associated endopeptidase
    pfam01454
    Location:286454
    MAGE; MAGE family
  5. NM_030700.3NP_109625.1  melanoma-associated antigen D2

    See identical proteins and their annotated locations for NP_109625.1

    Status: VALIDATED

    Source sequence(s)
    AJ277114, BP757994, CA752082
    Consensus CDS
    CCDS30466.1
    UniProtKB/TrEMBL
    Q9ER67
    Related
    ENSMUSP00000108319.3, ENSMUST00000112699.9
    Conserved Domains (3) summary
    PRK13335
    Location:32125
    PRK13335; superantigen-like protein SSL3; Reviewed
    PRK13914
    Location:33224
    PRK13914; invasion associated endopeptidase
    pfam01454
    Location:286454
    MAGE; MAGE family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    149589417..149597358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011247882.2XP_011246184.1  melanoma-associated antigen D2 isoform X2

    See identical proteins and their annotated locations for XP_011246184.1

    UniProtKB/TrEMBL
    Q99PB4
    Conserved Domains (3) summary
    PRK13335
    Location:32125
    PRK13335; superantigen-like protein SSL3; Reviewed
    PRK13914
    Location:33224
    PRK13914; invasion associated endopeptidase
    pfam01454
    Location:286454
    MAGE; MAGE family
  2. XM_006528998.5XP_006529061.1  melanoma-associated antigen D2 isoform X1

    See identical proteins and their annotated locations for XP_006529061.1

    UniProtKB/TrEMBL
    Q9ER67
    Conserved Domains (3) summary
    PRK13335
    Location:32125
    PRK13335; superantigen-like protein SSL3; Reviewed
    PRK13914
    Location:33224
    PRK13914; invasion associated endopeptidase
    pfam01454
    Location:286454
    MAGE; MAGE family
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