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AT2G25500 Inosine triphosphate pyrophosphatase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817088, updated on 15-Oct-2023

Summary

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Gene symbol
AT2G25500
Gene description
Inosine triphosphate pyrophosphatase family protein
Primary source
Araport:AT2G25500
Locus tag
AT2G25500
See related
TAIR:AT2G25500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13B15.16; F13B15_16
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Genomic context

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See AT2G25500 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (10854652..10854948, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene prolamin-like protein (DUF784) Neighboring gene EIN3-binding F box protein 1 Neighboring gene uncharacterized protein Neighboring gene Drug/metabolite transporter superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables nucleoside triphosphate diphosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Inosine triphosphate pyrophosphatase family protein
NP_565598.3
  • Inosine triphosphate pyrophosphatase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10854652..10854948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128107.3 → NP_565598.3  Inosine triphosphate pyrophosphatase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565598.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X1A6, A0A654F6S2, Q9SKJ9
    Conserved Domains (1) summary
    cl00276
    Location:12 → 98
    Maf_Ham1; Maf, a nucleotide binding protein, has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides, ...
Nucleotide Protein
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