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SLC7A5P1 solute carrier family 7 member 5 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 81893, updated on 11-Jun-2021

Summary

Official Symbol
SLC7A5P1provided by HGNC
Official Full Name
solute carrier family 7 member 5 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:29458
See related
Ensembl:ENSG00000260727
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DC49; MLAS; LAT1-3TM; hLAT1-3TM
Summary
This locus represents a pseudogene of the L-type amino acid transporter 1. Transcripts initiating at this locus read through to downstream SMG1 pseudogene 2 (SMG1P2). [provided by RefSeq, Feb 2016]
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Genomic context

See SLC7A5P1 in Genome Data Viewer
Location:
16p11.2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (29613103..29613725, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (29624424..29625046, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928556 Neighboring gene nuclear pore complex interacting protein family member B12 Neighboring gene SMG1 pseudogene 2 Neighboring gene uncharacterized LOC105371168 Neighboring gene microRNA 3680-2 Neighboring gene carbonic anhydrase 5A pseudogene 1 Neighboring gene Sharpr-MPRA regulatory region 12377

Genomic regions, transcripts, and products

General gene information

Other Names

  • SLC7A5 pseudogene
  • hLAT1 3-transmembrane protein MLAS
  • putative L-type amino acid transporter 1-like protein MLAS
  • solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
  • solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 pseudogene 1

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables L-amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in L-alpha-amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in L-amino acid transport IEA
Inferred from Electronic Annotation
more info
 
involved_in amino acid transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046751.3 

    Range
    101..723
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    29613103..29613725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_031211.3: Suppressed sequence

    Description
    NM_031211.3: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
  2. NR_002593.1: Suppressed sequence

    Description
    NR_002593.1: This RefSeq was removed because the gene is now considered a non-transcribed pseudogene.
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