U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CWINV5 cell wall invertase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820590, updated on 15-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
CWINV5
Gene description
cell wall invertase 5
Primary source
Araport:AT3G13784
Locus tag
AT3G13784
See related
TAIR:AT3G13784
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtcwINV5; cell wall invertase 5
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CWINV5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (4528362..4530713, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene transmembrane nine 7 Neighboring gene SMAD/FHA domain-containing protein Neighboring gene nucleosome assembly protein1;4 Neighboring gene ncRNA Neighboring gene Glycosyl hydrolases family 32 protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables beta-fructofuranosidase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
cell wall invertase 5
NP_187994.1
  • cell wall invertase 5 (CWINV5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2); Has 4239 Blast hits to 4169 proteins in 1239 species: Archae - 18; Bacteria - 2618; Metazoa - 95; Fungi - 286; Plants - 1036; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4528362..4530713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338076.1 → NP_001326013.1  cell wall invertase 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JEI9, Q9LIB9
    UniProtKB/TrEMBL
    A0A178VBC7

  2. NM_001338077.1 → NP_001326012.1  cell wall invertase 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBC7, A0A1I9LMZ4

  3. NM_112231.2 → NP_187994.1  cell wall invertase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187994.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBC7, A0A5S9XBW5, A0A654F6X7
    Conserved Domains (1) summary
    smart00640
    Location:47 → 525
    Glyco_32; Glycosyl hydrolases family 32

  4. NM_001338078.1 → NP_001326014.1  cell wall invertase 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBC7, A0A1I9LMZ6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LIB9.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools