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UBQ14 Ubiquitin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828148, updated on 8-Jul-2021

Summary

Gene symbol
UBQ14
Gene description
Ubiquitin family protein
Primary source
Araport:AT4G02890
Locus tag
AT4G02890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T5J8.21; T5J8_21
Summary
Polyubiquitin gene containing 4 ubiquitin repeats.
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Genomic context

See UBQ14 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (1278530..1280166, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ELKS/Rab6-interacting/CAST family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ERD (early-responsive to dehydration stress) family protein Neighboring gene ncRNA Neighboring gene hypothetical protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

NM_001125450.2
NM_116523.3
NM_178960.2
NM_178961.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein tag IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables ubiquitin protein ligase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within ubiquitin-dependent protein catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plant-type vacuole HDA PubMed 

General protein information

Preferred Names
Ubiquitin family protein
NP_001118922.1
  • UBQ14; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_567247.2
  • UBQ14; INVOLVED IN: protein modification process, ubiquitin-dependent protein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_849291.1
  • UBQ14; INVOLVED IN: protein modification process, ubiquitin-dependent protein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.4); Has 21375 Blast hits to 7210 proteins in 724 species: Archae - 0; Bacteria - 57; Metazoa - 10015; Fungi - 2460; Plants - 4438; Viruses - 488; Other Eukaryotes - 3917 (source: NCBI BLink).
NP_849292.1
  • UBQ14; INVOLVED IN: protein modification process, ubiquitin-dependent protein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.6); Has 26633 Blast hits to 7217 proteins in 726 species: Archae - 0; Bacteria - 80; Metazoa - 12516; Fungi - 3023; Plants - 5428; Viruses - 651; Other Eukaryotes - 4935 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    1278530..1280166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001125450.2NP_001118922.1  Ubiquitin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001118922.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q3E7T8, Q8H159
    UniProtKB/TrEMBL
    A0A178V886, J7FN14
    Conserved Domains (1) summary
    cd01803
    Location:77152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
  2. NM_178960.2NP_849291.1  Ubiquitin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849291.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0CH33, Q3E7T8
    UniProtKB/TrEMBL
    Q8H0Y0
    Conserved Domains (1) summary
    cd01803
    Location:77152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
  3. NM_178961.1NP_849292.1  Ubiquitin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849292.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q3E7T8, Q8H159
    UniProtKB/TrEMBL
    A0A178V886, J7FN14
    Conserved Domains (1) summary
    cd01803
    Location:77152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
  4. NM_116523.3NP_567247.2  Ubiquitin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567247.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0CH33, Q3E7T8
    UniProtKB/TrEMBL
    Q8H0Y0
    Conserved Domains (1) summary
    cd01803
    Location:77152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
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