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CAP1 cyclase associated protein 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829600, updated on 7-Sep-2023

Summary

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Gene symbol
CAP1
Gene description
cyclase associated protein 1
Primary source
Araport:AT4G34490
Locus tag
AT4G34490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCAP1; CAP 1; cyclase associated protein 1; T4L20.70; T4L20_70
Summary
CYCLASE ASSOCIATED PROTEIN
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (16484470..16487574, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene SKP1-like 12 Neighboring gene Protein kinase superfamily protein Neighboring gene 3-ketoacyl-CoA synthase 17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Knockout of cyclase-associated protein CAP1 confers tolerance towards salt and osmotic stress in Arabidopsis. Zhang Q, et al. J Plant Physiol, 2023 Jun. PMID 37087999
  2. Arabidopsis CAP1 - a key regulator of actin organisation and development. Deeks MJ, et al. J Cell Sci, 2007 Aug 1. PMID 17635992
  3. Identification of Arabidopsis cyclase-associated protein 1 as the first nucleotide exchange factor for plant actin. Chaudhry F, et al. Mol Biol Cell, 2007 Aug. PMID 17538023, Free PMC Article
  4. Arabidopsis CAP regulates the actin cytoskeleton necessary for plant cell elongation and division. Barrero RA, et al. Plant Cell, 2002 Jan. PMID 11826305, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Knockout of cyclase-associated protein CAP1 confers tolerance towards salt and osmotic stress in Arabidopsis.
    Title: Knockout of cyclase-associated protein CAP1 confers tolerance towards salt and osmotic stress in Arabidopsis.
  2. findings show that mutants in CAP1 display a phenotype that establishes CAP1 as a fundamental facilitator of actin dynamics over a wide range of plant tissues
    Title: Arabidopsis CAP1 - a key regulator of actin organisation and development.
  3. These results and the understanding of other actin-binding proteins implicate CAP1 as a central player in regulating the pool of unpolymerized ATP-actin.
    Title: Identification of Arabidopsis cyclase-associated protein 1 as the first nucleotide exchange factor for plant actin.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_001342287.1
NM_119614.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables actin binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables actin binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within actin cytoskeleton organization TAS
Traceable Author Statement
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within unidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cyclase associated protein 1
NP_195175.1
  • cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16484470..16487574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119614.6 → NP_195175.1  cyclase associated protein 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195175.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65902
    UniProtKB/TrEMBL
    A0A178UWX1, A0A5S9XYZ5, A0A654FVT5
    Conserved Domains (2) summary
    pfam01213
    Location:3 → 68
    CAP_N; Adenylate cyclase associated (CAP) N terminal
    pfam08603
    Location:316 → 473
    CAP_C; Adenylate cyclase associated (CAP) C terminal

  2. NM_001342287.1 → NP_001329504.1  cyclase associated protein 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B7W9, A0A654FVT5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O65902.1

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