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CTRG_00857 hypothetical protein [ Candida tropicalis MYA-3404 ]

Gene ID: 8302186, updated on 17-May-2024

Summary

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Gene symbol
CTRG_00857
Gene description
hypothetical protein
Primary source
FungiDB:CTRG_00857
Locus tag
CTRG_00857
See related
VEuPathDB:CTRG_00857
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Candida tropicalis MYA-3404 (strain: MYA-3404)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CTRG_00857 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_003020038.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003020038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G, et al. Nature, 2009 Jun 4. PMID 19465905, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribosomal large subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rescue of stalled ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome-associated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RQC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_002546076.1
  • Candida DB at Institut Pasteur CTRG_00857

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003020038.1 Reference assembly

    Range
    1935163..1937736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002546030.1 → XP_002546076.1  conserved hypothetical protein [Candida tropicalis MYA-3404]

    See identical proteins and their annotated locations for XP_002546076.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5M468
    Conserved Domains (4) summary
    COG1293
    Location:159 → 526
    YloA; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains [Translation, ribosomal structure and biogenesis]
    pfam05670
    Location:413 → 490
    DUF814; Domain of unknown function (DUF814)
    pfam11923
    Location:714 → 822
    DUF3441; Domain of unknown function (DUF3441)
    cl20817
    Location:645 → 715
    GBP_C; Guanylate-binding protein, C-terminal domain
Protein Accession Links
GenPept Link UniProtKB Link
EER36118.1

Gene LinkOut

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Molecular Biology Databases