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CTRG_01026 U3 small nucleolar ribonucleoprotein protein IMP3 [ Candida tropicalis MYA-3404 ]

Gene ID: 8302203, updated on 17-May-2024

Summary

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Gene symbol
CTRG_01026
Gene description
U3 small nucleolar ribonucleoprotein protein IMP3
Primary source
FungiDB:CTRG_01026
Locus tag
CTRG_01026
See related
VEuPathDB:CTRG_01026
Gene type
protein coding
RNA name
U3 small nucleolar ribonucleoprotein protein IMP3
RefSeq status
PROVISIONAL
Organism
Candida tropicalis MYA-3404 (strain: MYA-3404)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CTRG_01026 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_003020038.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003020038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G, et al. Nature, 2009 Jun 4. PMID 19465905, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar ribonucleoprotein protein IMP3
XP_002546244.1
  • Candida DB at Institut Pasteur CTRG_01026

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003020038.1 Reference assembly

    Range
    2338870..2339421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002546198.1 → XP_002546244.1  U3 small nucleolar ribonucleoprotein protein IMP3 [Candida tropicalis MYA-3404]

    See identical proteins and their annotated locations for XP_002546244.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5M4N6
    Conserved Domains (1) summary
    COG0522
    Location:16 → 168
    RpsD; Ribosomal protein S4 or related protein [Translation, ribosomal structure and biogenesis]
Protein Accession Links
GenPept Link UniProtKB Link
EER36286.1

Gene LinkOut

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Molecular Biology Databases
Research Materials