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APT5 adenine phosphoribosyltransferase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830985, updated on 15-Feb-2024

Summary

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Gene symbol
APT5
Gene description
adenine phosphoribosyltransferase 5
Primary source
Araport:AT5G11160
Locus tag
AT5G11160
See related
TAIR:AT5G11160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
adenine phosphoribosyltransferase 5; F2I11.50; F2I11_50
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Genomic context

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See APT5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (3550300..3552255)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phospholipase-like protein (PEARLI 4) family protein Neighboring gene vesicle-associated membrane protein 713 Neighboring gene DEAD/DEAH box RNA helicase family protein Neighboring gene glutamate receptor 2.6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Adenine phosphoribosyl transferase 1 is a key enzyme catalyzing cytokinin conversion from nucleobases to nucleotides in Arabidopsis. Zhang X, et al. Mol Plant, 2013 Sep. PMID 23658065
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
  4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_121154.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables adenine phosphoribosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables adenine phosphoribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables adenine phosphoribosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in AMP salvage IEA
Inferred from Electronic Annotation
more info
  
involved_in adenine salvage IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
adenine phosphoribosyltransferase 5
NP_196677.1
  • adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3550300..3552255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001343159.1 → NP_001329978.1  adenine phosphoribosyltransferase 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B9C5
    Conserved Domains (1) summary
    PLN02293
    Location:1 → 148
    PLN02293; adenine phosphoribosyltransferase

  2. NM_121154.4 → NP_196677.1  adenine phosphoribosyltransferase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196677.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LFP0
    UniProtKB/TrEMBL
    A0A178UPD1, A0A5S9Y373, A0A7G2F9T5
    Conserved Domains (1) summary
    PLN02293
    Location:1 → 187
    PLN02293; adenine phosphoribosyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LFP0.1

Gene LinkOut

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