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AT5G11400 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831011, updated on 15-Oct-2023

Summary

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Gene symbol
AT5G11400
Gene description
Protein kinase superfamily protein
Primary source
Araport:AT5G11400
Locus tag
AT5G11400
See related
TAIR:AT5G11400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2I11.290; F2I11_290
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Genomic context

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See AT5G11400 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (3636614..3638059, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FBD / Leucine Rich Repeat domains containing protein Neighboring gene 1-deoxy-D-xylulose 5-phosphate synthase 3 Neighboring gene WPP domain-interacting protein 1 Neighboring gene Protein kinase superfamily protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Investigations into a putative role for the novel BRASSIKIN pseudokinases in compatible pollen-stigma interactions in Arabidopsis thaliana. Doucet J, et al. BMC Plant Biol, 2019 Dec 11. PMID 31829135, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within pollen-stigma interaction IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Protein kinase superfamily protein
NP_001190289.1
  • Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11410.1).
NP_196701.2
  • Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3636614..3638059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203360.1 → NP_001190289.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190289.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JXU6, Q1PDX7, Q9LFL7
    UniProtKB/TrEMBL
    A0A654G073
    Conserved Domains (1) summary
    cl21453
    Location:61 → 299
    PKc_like; Protein Kinases, catalytic domain

  2. NM_121178.2 → NP_196701.2  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196701.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UPP9, F4JXU7
    Conserved Domains (1) summary
    cl21453
    Location:61 → 193
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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