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AT5G12000 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831073, updated on 15-Oct-2023

Summary

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Gene symbol
AT5G12000
Gene description
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Primary source
Araport:AT5G12000
Locus tag
AT5G12000
See related
TAIR:AT5G12000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14F18.170; F14F18_170
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Genomic context

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See AT5G12000 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (3873799..3877004, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene conserved oligomeric Golgi complex component-related / COG complex component-like protein Neighboring gene proline-rich family protein Neighboring gene nuclease Neighboring gene 17.6 kDa class II heat shock protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001343227.1
NM_121238.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
NP_196761.2
  • Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G26150.1); Has 120834 Blast hits to 118661 proteins in 4690 species: Archae - 119; Bacteria - 15139; Metazoa - 44037; Fungi - 10386; Plants - 32764; Viruses - 275; Other Eukaryotes - 18114 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3873799..3877004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121238.5 → NP_196761.2  kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196761.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UHL6, A0A5S9Y3G2, A0A7G2F6W1, Q0WVJ0
    Conserved Domains (2) summary
    cd01989
    Location:16 → 154
    STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...
    cd14066
    Location:428 → 688
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

  2. NM_001343227.1 → NP_001330888.1  kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BC68, A0A5S9Y3G2, A0A7G2F6W1
Nucleotide Protein
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