U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cand7 Lung seven transmembrane receptor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831970, updated on 15-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
Cand7
Gene description
Lung seven transmembrane receptor family protein
Primary source
Araport:AT5G18520
Locus tag
AT5G18520
See related
TAIR:AT5G18520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
candidate G-protein Coupled Receptor 7; T28N17.5
Summary
Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Cand7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (6144855..6146603)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene vacuolar sorting-associated protein (DUF946) Neighboring gene Protein kinase superfamily protein Neighboring gene Aminotransferase-like, plant mobile domain family protein Neighboring gene protein serine/threonine kinase Neighboring gene E3 ubiquitin-protein ligase Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A G protein-coupled receptor-like module regulates cellulose synthase secretion from the endomembrane system in Arabidopsis. McFarlane HE, et al. Dev Cell, 2021 May 17. PMID 33878345, Free PMC Article
  2. Two G-protein-coupled-receptor candidates, Cand2 and Cand7, are involved in Arabidopsis root growth mediated by the bacterial quorum-sensing signals N-acyl-homoserine lactones. Jin G, et al. Biochem Biophys Res Commun, 2012 Jan 20. PMID 22206669
  3. Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling. Gookin TE, et al. Genome Biol, 2008. PMID 18671868, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. These results suggest that Cand2 and Cand7 are involved in the regulation of root growth by bacterial N-acyl-homoserine lactones and that GPCRs play a role in mediating interactions between plants and microbes. [Cand7]
    Title: Two G-protein-coupled-receptor candidates, Cand2 and Cand7, are involved in Arabidopsis root growth mediated by the bacterial quorum-sensing signals N-acyl-homoserine lactones.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

  • At5g18520_Arabidopsis_lyrata_ssp._lyrata_CAN10 (e-PCR)
  • At5g18520_Arabidopsis_lyrata_ssp._petraea_GER1 (e-PCR)

Homology

NM_121857.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in G protein-coupled receptor signaling pathway IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within positive regulation of cellulose biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within protein localization to plasma membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to molecule of bacterial origin IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to molecule of bacterial origin IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within root morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
is_active_in trans-Golgi network IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Lung seven transmembrane receptor family protein
NP_197353.1
  • Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT3G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    6144855..6146603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121857.4 → NP_197353.1  Lung seven transmembrane receptor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197353.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JY11, Q56YB8, Q681D1
    UniProtKB/TrEMBL
    A0A178UFK2, A0A5S9Y596, A0A654G2C2
    Conserved Domains (1) summary
    cl21735
    Location:135 → 416
    Lung_7-TM_R; Lung seven transmembrane receptor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JY11.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools