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AT5G20090 Uncharacterized protein family (UPF0041) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832131, updated on 7-Sep-2023

Summary

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Gene symbol
AT5G20090
Gene description
Uncharacterized protein family (UPF0041)
Primary source
Araport:AT5G20090
Locus tag
AT5G20090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtMPC1; F28I16.240; F28I16_240; mitochondrial pyruvate carrier 1; MPC1
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (6786834..6788680, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene nudix hydrolase homolog 19 Neighboring gene FAD/NAD(P)-binding oxidoreductase Neighboring gene plant/protein Neighboring gene Dynein light chain type 1 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The mitochondrial pyruvate carrier (MPC) complex mediates one of three pyruvate-supplying pathways that sustain Arabidopsis respiratory metabolism. Le XH, et al. Plant Cell, 2021 Aug 31. PMID 34137858, Free PMC Article
  2. The ongoing story: the mitochondria pyruvate carrier 1 in plant stress response in Arabidopsis. Wang M, et al. Plant Signal Behav, 2014. PMID 25482773, Free PMC Article
  3. AGP30: Cd tolerance related gene associate with mitochondrial pyruvate carrier 1. Jing Y, et al. Plant Signal Behav, 2019. PMID 31198086, Free PMC Article
  4. Mitochondrial pyruvate carrier 1 mediates abscisic acid-regulated stomatal closure and the drought response by affecting cellular pyruvate content in Arabidopsis thaliana. Shen JL, et al. BMC Plant Biol, 2017 Nov 22. PMID 29166881, Free PMC Article
  5. NRGA1, a putative mitochondrial pyruvate carrier, mediates ABA regulation of guard cell ion channels and drought stress responses in Arabidopsis. Li CL, et al. Mol Plant, 2014 Oct. PMID 24842572

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The mitochondrial pyruvate carrier (MPC) complex mediates one of three pyruvate-supplying pathways that sustain Arabidopsis respiratory metabolism.
    Title: The mitochondrial pyruvate carrier (MPC) complex mediates one of three pyruvate-supplying pathways that sustain Arabidopsis respiratory metabolism.
  2. AGP30, which specifically expresses in root and is significantly regulated by MPC under Cadmium stress.[MPC1]
    Title: AGP30: Cd tolerance related gene associate with mitochondrial pyruvate carrier 1.
  3. MPC1 is required for cadmium tolerance in Arabidopsis.
    Title: Mitochondrial Pyruvate Carriers Prevent Cadmium Toxicity by Sustaining the TCA Cycle and Glutathione Synthesis.
  4. findings revealed the essential roles of MPC1 and pyruvate in stomatal movement and plant drought resistance
    Title: Mitochondrial pyruvate carrier 1 mediates abscisic acid-regulated stomatal closure and the drought response by affecting cellular pyruvate content in Arabidopsis thaliana.
  5. MPC1 may associate with NRGA1 for mitochondrial pyruvate transport and is involved in abscissic acid mediated stomatal movements in Arabidopsis.[MPC1]
    Title: The ongoing story: the mitochondria pyruvate carrier 1 in plant stress response in Arabidopsis.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

NM_001085137.1
NM_001125782.1
NM_001343637.1
NM_122016.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial pyruvate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in mitochondrial pyruvate transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of stomatal movement IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in plastid HDA PubMed 

General protein information

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Preferred Names
Uncharacterized protein family (UPF0041)
NP_001078606.1
  • Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 929 Blast hits to 928 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 402; Fungi - 251; Plants - 173; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
NP_001119254.1
  • Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_197509.1
  • Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 929 Blast hits to 928 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 402; Fungi - 251; Plants - 173; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    6786834..6788680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122016.3 → NP_197509.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197509.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q949R9
    UniProtKB/TrEMBL
    A0A178UR79, A0A5S9Y829
    Conserved Domains (1) summary
    pfam03650
    Location:6 → 107
    MPC; Uncharacterized protein family (UPF0041)

  2. NM_001343637.1 → NP_001330067.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q949R9
    UniProtKB/TrEMBL
    A0A178UR79, A0A5S9Y829
    Conserved Domains (1) summary
    pfam03650
    Location:6 → 107
    MPC; Uncharacterized protein family (UPF0041)

  3. NM_001085137.1 → NP_001078606.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078606.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q949R9
    UniProtKB/TrEMBL
    A0A178UR79, A0A5S9Y829
    Conserved Domains (1) summary
    pfam03650
    Location:6 → 107
    MPC; Uncharacterized protein family (UPF0041)

  4. NM_001125782.1 → NP_001119254.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119254.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3H6E6
    Conserved Domains (1) summary
    pfam03650
    Location:6 → 96
    MPC; uncharacterized protein family (UPF0041)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q949R9.1

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