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AT5G51830 pfkB-like carbohydrate kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835258, updated on 7-Sep-2023

Summary

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Gene symbol
AT5G51830
Gene description
pfkB-like carbohydrate kinase family protein
Primary source
Araport:AT5G51830
Locus tag
AT5G51830
See related
TAIR:AT5G51830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MIO24.3; MIO24_3
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Genomic context

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See AT5G51830 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (21069110..21071739)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phosphoglucomutase Neighboring gene junctophilin-like protein Neighboring gene Defensin-like (DEFL) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis Fructokinases Are Important for Seed Oil Accumulation and Vascular Development. Stein O, et al. Front Plant Sci, 2016. PMID 28119723, Free PMC Article
  2. Identification and biochemical characterization of the fructokinase gene family in Arabidopsis thaliana. Riggs JW, et al. BMC Plant Biol, 2017 Apr 26. PMID 28441933, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

NM_001344963.1
NM_124562.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables fructokinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within fatty acid biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within fructose metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in starch biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
pfkB-like carbohydrate kinase family protein
NP_001318782.1
  • pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G66430.1); Has 18609 Blast hits to 18603 proteins in 2379 species: Archae - 380; Bacteria - 13935; Metazoa - 140; Fungi - 105; Plants - 504; Viruses - 0; Other Eukaryotes - 3545 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21069110..21071739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001344963.1 → NP_001318782.1  pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FLH8
    UniProtKB/TrEMBL
    A0A178UAE0, A0A5S9YD67
    Conserved Domains (1) summary
    PLN02323
    Location:13 → 343
    PLN02323; probable fructokinase

  2. NM_124562.3 → NP_199996.1  pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199996.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FLH8
    UniProtKB/TrEMBL
    A0A178UAE0, A0A5S9YD67
    Conserved Domains (1) summary
    PLN02323
    Location:13 → 343
    PLN02323; probable fructokinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FLH8.1

Gene LinkOut

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