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AT5G57200 ENTH/ANTH/VHS superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835826, updated on 15-Oct-2023

Summary

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Gene symbol
AT5G57200
Gene description
ENTH/ANTH/VHS superfamily protein
Primary source
Araport:AT5G57200
Locus tag
AT5G57200
See related
TAIR:AT5G57200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MJB24.1; MJB24_1
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Genomic context

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See AT5G57200 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (23177525..23180853)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene chloroplast import apparatus 2 Neighboring gene phosphatidylserine decarboxylase 2 Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene cytochrome P450, family 81, subfamily F, polypeptide 2 Neighboring gene Thioredoxin superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
  
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in clathrin coat assembly IEA
Inferred from Electronic Annotation
more info
  
involved_in clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 

General protein information

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Preferred Names
ENTH/ANTH/VHS superfamily protein
NP_200530.1
  • ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G25940.1); Has 13426 Blast hits to 6658 proteins in 473 species: Archae - 43; Bacteria - 452; Metazoa - 5386; Fungi - 950; Plants - 797; Viruses - 658; Other Eukaryotes - 5140 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23177525..23180853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125102.2 → NP_200530.1  ENTH/ANTH/VHS superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200530.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVD8
    UniProtKB/TrEMBL
    A0A178U8V1, A0A7G2FL30
    Conserved Domains (1) summary
    pfam07651
    Location:31 → 306
    ANTH; ANTH domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LVD8.1

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