U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MYB36 myb domain protein 36 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835866, updated on 7-Sep-2023

Summary

Go to the top of the page Help
Gene symbol
MYB36
Gene description
myb domain protein 36
Primary source
Araport:AT5G57620
Locus tag
AT5G57620
See related
TAIR:AT5G57620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtMYB36; MUA2.20; MUA2_20; myb domain protein 36
Summary
Encodes a putative transcription factor (MYB36).
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MYB36 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (23334767..23336632)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene adenosylmethionine-8-amino-7-oxononanoate transaminase Neighboring gene kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene CBL-interacting protein kinase 21

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Control of Arabidopsis lateral root primordium boundaries by MYB36. Fernández-Marcos M, et al. New Phytol, 2017 Jan. PMID 27891649, Free PMC Article
  2. MYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root. Liberman LM, et al. Proc Natl Acad Sci U S A, 2015 Sep 29. PMID 26371322, Free PMC Article
  3. The MYB36 transcription factor orchestrates Casparian strip formation. Kamiya T, et al. Proc Natl Acad Sci U S A, 2015 Aug 18. PMID 26124109, Free PMC Article
  4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. These results uncover a role for MYB36 outside the endodermis during lateral root primordia development.
    Title: Control of Arabidopsis lateral root primordium boundaries by MYB36.
  2. results uncover a role for MYB36 outside the endodermis during LRP development through a mechanism analogous to regulating the proliferation/differentiation transition in the root meristem.
    Title: Control of Arabidopsis lateral root primordium boundaries by MYB36.
  3. MYB36 is controlling expression of the machinery required to locally polymerize lignin in a fine band in the cell wall for the formation of the Casparian strip
    Title: The MYB36 transcription factor orchestrates Casparian strip formation.
  4. MYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root.
    Title: MYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_125143.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IPI
Inferred from Physical Interaction
more info
 PubMed 
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables transcription cis-regulatory region binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell differentiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in endodermal cell differentiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in monoatomic ion homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in negative regulation of cell population proliferation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in positive regulation of cell differentiation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of root morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in Casparian strip IDA
Inferred from Direct Assay
more info
 PubMed 
located_in Casparian strip IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
myb domain protein 36
NP_200570.1
  • myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23334767..23336632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125143.4 → NP_200570.1  myb domain protein 36 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200570.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FKL2, Q9ZTE6
    UniProtKB/TrEMBL
    A0A5S9YEY7, A0A654GC54
    Conserved Domains (1) summary
    PLN03091
    Location:1 → 122
    PLN03091; hypothetical protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FKL2.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools