U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RLK1 receptor-like protein kinase 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836211, updated on 15-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
RLK1
Gene description
receptor-like protein kinase 1
Primary source
Araport:AT5G60900
Locus tag
AT5G60900
See related
TAIR:AT5G60900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
receptor-like protein kinase 1
Summary
Encodes a receptor-like protein kinase.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RLK1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (24498369..24501770, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene breaking of asymmetry in the stomatal lineage Neighboring gene myb domain protein 34 Neighboring gene AGAMOUS-like 8 Neighboring gene COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Direct binding of a plant LysM receptor-like kinase, LysM RLK1/CERK1, to chitin in vitro. Iizasa E, et al. J Biol Chem, 2010 Jan 29. PMID 19951949, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
  3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arabidopsis LysM receptor-like kinase, LysM RLK1/CERK1, binds to chitin in vitro
    Title: Direct binding of a plant LysM receptor-like kinase, LysM RLK1/CERK1, to chitin in vitro.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

NM_001345434.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calmodulin binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
receptor-like protein kinase 1
NP_001318851.1
  • receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24498369..24501770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345434.1 → NP_001318851.1  receptor-like protein kinase 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4K0I9, Q39202, Q8H7E0, Q9SAR9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools