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AT5G66660 pectinesterase, putative (DUF677) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836798, updated on 7-Sep-2023

Summary

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Gene symbol
AT5G66660
Gene description
pectinesterase, putative (DUF677)
Primary source
Araport:AT5G66660
Locus tag
AT5G66660
See related
TAIR:AT5G66660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MSN2.4; MSN2_4
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Genomic context

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See AT5G66660 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (26609144..26610615, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene calcium uniporter (DUF607) Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene pectinesterase, putative (DUF677) Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_126064.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
pectinesterase, putative (DUF677)
NP_201467.1
  • Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26609144..26610615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126064.2 → NP_201467.1  pectinesterase, putative (DUF677) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201467.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MFR6, Q9LVR4
    UniProtKB/TrEMBL
    A0A178UG23, A0A654GFU1
    Conserved Domains (1) summary
    pfam05055
    Location:55 → 392
    DUF677; Protein of unknown function (DUF677)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LVR4.1

Gene LinkOut

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