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AT1G16000 GAG1At protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838170, updated on 15-Oct-2023

Summary

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Gene symbol
AT1G16000
Gene description
GAG1At protein
Primary source
Araport:AT1G16000
Locus tag
AT1G16000
See related
TAIR:AT1G16000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T24D18.10; T24D18_10
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Genomic context

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See AT1G16000 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (5494533..5495359)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DNA glycosylase superfamily protein Neighboring gene NDH-dependent cyclic electron flow 1 Neighboring gene cyclic nucleotide gated channel 7 Neighboring gene magnesium transporter 2 Neighboring gene vacuolar fusion protein (DUF1712) Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distinct pathways mediate the sorting of tail-anchored proteins to the plastid outer envelope. Dhanoa PK, et al. PLoS One, 2010 Apr 14. PMID 20418952, Free PMC Article
  2. An RK/ST C-Terminal Motif is Required for Targeting of OEP7.2 and a Subset of Other Arabidopsis Tail-Anchored Proteins to the Plastid Outer Envelope Membrane. Teresinski HJ, et al. Plant Cell Physiol, 2019 Mar 1. PMID 30521026
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_101468.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
colocalizes_with plastid outer membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
GAG1At protein
NP_563987.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5494533..5495359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101468.2 → NP_563987.1  GAG1At protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563987.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WCL1, A0A7G2DTJ5, P93048
Nucleotide Protein
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