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AT1G49960 Xanthine/uracil permease family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841419, updated on 15-Feb-2024

Summary

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Gene symbol
AT1G49960
Gene description
Xanthine/uracil permease family protein
Primary source
Araport:AT1G49960
Locus tag
AT1G49960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2J10.15; F2J10_15
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Genomic context

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See AT1G49960 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Sequence:
Chromosome: 1; NC_003070.9 (18498639..18501886)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene telomere repeat binding factor 1 Neighboring gene CLP protease proteolytic subunit 1 Neighboring gene photosystem I reaction center subunit N Neighboring gene DNA/RNA polymerases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_103883.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Xanthine/uracil permease family protein
NP_175418.1
  • Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G62890.3); Has 9237 Blast hits to 9206 proteins in 1901 species: Archae - 67; Bacteria - 7526; Metazoa - 351; Fungi - 134; Plants - 458; Viruses - 6; Other Eukaryotes - 695 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18498639..18501886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103883.2 → NP_175418.1  Xanthine/uracil permease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175418.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P93039, Q93ZL2, Q9LPM0
    UniProtKB/TrEMBL
    A0A178WLI0, A0A5S9WNJ9, A0A654EM65
    Conserved Domains (1) summary
    cl23746
    Location:34 → 436
    Xan_ur_permease; Permease family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P93039.2

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