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AT1G61770 Chaperone DnaJ-domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842474, updated on 15-Feb-2024

Summary

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Gene symbol
AT1G61770
Gene description
Chaperone DnaJ-domain superfamily protein
Primary source
Araport:AT1G61770
Locus tag
AT1G61770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T13M11.13; T13M11_13
Summary
J domain protein.
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Sequence:
Chromosome: 1; NC_003070.9 (22810111..22812677)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Receptor-like protein kinase-related family protein Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene postsynaptic protein-like protein Neighboring gene Oligosaccharyltransferase complex/magnesium transporter family protein Neighboring gene PAK-box/P21-Rho-binding family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
  2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_104859.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in endoplasmic reticulum HDA PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
Chaperone DnaJ-domain superfamily protein
NP_176370.2
  • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1); Has 22399 Blast hits to 22393 proteins in 3184 species: Archae - 166; Bacteria - 8830; Metazoa - 4267; Fungi - 2142; Plants - 2270; Viruses - 12; Other Eukaryotes - 4712 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22810111..22812677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104859.3 → NP_176370.2  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176370.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GUN6, Q8RXY7, Q9SYB3
    UniProtKB/TrEMBL
    A0A178WMR2, A0A5S9WRB8, A0A7G2DZ83
    Conserved Domains (1) summary
    pfam00226
    Location:34 → 95
    DnaJ; DnaJ domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GUN6.1

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