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AT1G76720 eukaryotic translation initiation factor 2 (eIF-2) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844006, updated on 15-Feb-2024

Summary

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Gene symbol
AT1G76720
Gene description
eukaryotic translation initiation factor 2 (eIF-2) family protein
Primary source
Araport:AT1G76720
Locus tag
AT1G76720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28O16.9; F28O16_9
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Genomic context

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Location:
chromosome: 1
Exon count:
16
Sequence:
Chromosome: 1; NC_003070.9 (28794144..28800402, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene calmodulin binding protein Neighboring gene miscRNA Neighboring gene SET domain group 26 Neighboring gene ncRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001334742.1
NM_106322.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
eukaryotic translation initiation factor 2 (eIF-2) family protein
NP_177798.3
  • eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76820.1); Has 176116 Blast hits to 120626 proteins in 4229 species: Archae - 1560; Bacteria - 50188; Metazoa - 57384; Fungi - 15710; Plants - 7705; Viruses - 672; Other Eukaryotes - 42897 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28794144..28800402 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106322.4 → NP_177798.3  eukaryotic translation initiation factor 2 (eIF-2) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177798.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EUP8, F4I410
    Conserved Domains (5) summary
    cd01887
    Location:630 → 839
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:623 → 1187
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:963 → 1057
    IF-2; Translation-initiation factor 2
    cd03703
    Location:850 → 960
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cd16266
    Location:1080 → 1174
    IF2_aeIF5B_IV; Domain IV of prokaryotic Initiation Factor 2 and archaeal and eukaryotic Initiation Factor 5

  2. NM_001334742.1 → NP_001322567.1  eukaryotic translation initiation factor 2 (eIF-2) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EUP8, Q9SRE1
    Conserved Domains (5) summary
    cd01887
    Location:663 → 872
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:656 → 1220
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:996 → 1090
    IF-2; Translation-initiation factor 2
    cd03703
    Location:883 → 993
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cd16266
    Location:1113 → 1207
    IF2_aeIF5B_IV; Domain IV of prokaryotic Initiation Factor 2 and archaeal and eukaryotic Initiation Factor 5
Nucleotide Protein
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