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AT1G78800 UDP-Glycosyltransferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844216, updated on 7-Sep-2023

Summary

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Gene symbol
AT1G78800
Gene description
UDP-Glycosyltransferase superfamily protein
Primary source
Araport:AT1G78800
Locus tag
AT1G78800
See related
TAIR:AT1G78800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9K20.16; F9K20_16
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Genomic context

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See AT1G78800 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (29625587..29628024, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene anaphase promoting complex 6 Neighboring gene pathogenesis-related family protein Neighboring gene centromere protein X Neighboring gene uncharacterized protein Neighboring gene LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_106527.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
UDP-Glycosyltransferase superfamily protein
NP_178001.2
  • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 14746 Blast hits to 14703 proteins in 2118 species: Archae - 647; Bacteria - 10061; Metazoa - 282; Fungi - 266; Plants - 467; Viruses - 0; Other Eukaryotes - 3023 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29625587..29628024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106527.4 → NP_178001.2  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178001.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IBV4, Q8LPF7
    Conserved Domains (2) summary
    cd03805
    Location:9 → 389
    GT1_ALG2_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2) ...
    COG0438
    Location:8 → 398
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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