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YLR297W uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 851004, updated on 3-Dec-2023

Summary

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Gene symbol
YLR297W
Gene description
uncharacterized protein
Primary source
SGD:S000004288
Locus tag
YLR297W
See related
AllianceGenome:SGD:S000004288
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in fungal-type vacuole membrane and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See YLR297W in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (724044..724433)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene F1F0 ATP synthase subunit h Neighboring gene uncharacterized protein Neighboring gene Yhc1p Neighboring gene gamma-glutamyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001144.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nuclear localization of Haa1, which is linked to its phosphorylation status, mediates lactic acid tolerance in Saccharomyces cerevisiae. Sugiyama M, et al. Appl Environ Microbiol, 2014 Jun. PMID 24682296, Free PMC Article
  2. Specific transcriptional responses induced by 8-methoxypsoralen and UVA in yeast. Dardalhon M, et al. FEMS Yeast Res, 2007 Sep. PMID 17608707, Free PMC Article
  3. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
  4. Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum. Colomina N, et al. J Biol Chem, 2008 Oct 17. PMID 18667435, Free PMC Article
  5. Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28. Zimmermann C, et al. G3 (Bethesda), 2017 Jun 7. PMID 28428242, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in fungal-type vacuole HDA PubMed 
located_in fungal-type vacuole membrane HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus HDA PubMed 
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_013400.1
  • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; not an essential gene; induced by treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from nucleus to vacuole upon DNA replication stress; YLR297W has a paralog, YOR186W, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    724044..724433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182185.1 → NP_013400.1  TPA: uncharacterized protein YLR297W [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013400.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VYU1, Q05899
    UniProtKB/TrEMBL
    A0A8H4BYD2, A7A1H8, B3RHH6, C7GVU2, C8ZDQ9, G2WJB9, N1P721
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q05899.1

Gene LinkOut

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