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SMT3 SUMO family protein SMT3 [ Saccharomyces cerevisiae S288C ]

Gene ID: 852122, updated on 13-Apr-2024

Summary

Gene symbol
SMT3
Gene description
SUMO family protein SMT3
Primary source
SGD:S000002918
Locus tag
YDR510W
See related
AllianceGenome:SGD:S000002918
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables protein tag. Involved in protein sumoylation. Located in condensed nuclear chromosome and septin ring. Used to study cancer. Human ortholog(s) of this gene implicated in orofacial cleft 10 and type 1 diabetes mellitus 5. Orthologous to several human genes including SUMO1 (small ubiquitin like modifier 1). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (1469400..1469705)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene protein kinase GIN4 Neighboring gene glutamine permease GNP1 Neighboring gene Sdh7p Neighboring gene Emi1p Neighboring gene dithiol glutaredoxin GRX2

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables protein tag activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein tag activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ubiquitin-like protein ligase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in protein sumoylation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein sumoylation IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in condensed nuclear chromosome IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in septin ring IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in septin ring IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
SUMO family protein SMT3
NP_010798.1
  • Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    1469400..1469705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180818.1NP_010798.1  TPA: SUMO family protein SMT3 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010798.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VTD1, Q12306
    UniProtKB/TrEMBL
    A0A6A5Q2F7, A6ZZ98, B3LFF9, C7GKU4, C8Z666, G2WBN7, N1P5U8
    Conserved Domains (1) summary
    COG5227
    Location:1101
    SMT3; Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones]