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RPC25 DNA-directed RNA polymerase III subunit RPC25 [ Saccharomyces cerevisiae S288C ]

Gene ID: 853713, updated on 4-Aug-2021

Summary

Gene symbol
RPC25
Gene description
DNA-directed RNA polymerase III subunit RPC25
Primary source
SGD:S000001627
Locus tag
YKL144C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
YKL1
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Genomic context

See RPC25 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_001143.9 (175843..176481, complement)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene Avt3p Neighboring gene proteasome regulatory particle base subunit RPT1 Neighboring gene Ltv1p Neighboring gene Mrp8p

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the RPC25 gene: The RPC25 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, A.thaliana, rice, and frog.

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to RNA polymerase III activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of RNA polymerase III complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
DNA-directed RNA polymerase III subunit RPC25
NP_012778.1
  • RNA polymerase III subunit C25; required for transcription initiation; forms a heterodimer with Rpc17p; paralog of Rpb7p

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 Reference assembly

    Range
    175843..176481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179710.1NP_012778.1  TPA: DNA-directed RNA polymerase III subunit RPC25 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012778.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P35718
    Conserved Domains (1) summary
    TIGR00448
    Location:1184
    rpoE; DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form
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