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CG17931 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 8674030, updated on 10-May-2024

Summary

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Official Symbol
CG17931provided by FlyBase
Primary source
FLYBASE:FBgn0038421
Locus tag
Dmel_CG17931
See related
AllianceGenome:FB:FBgn0038421
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:AT19233; Dmel\CG17931; Hero7
Summary
Located in cytosol. Is expressed in adult brain and adult brain cell body rind. Orthologous to several human genes including SERF2 (small EDRK-rich factor 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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See CG17931 in Genome Data Viewer
Location:
89B13-89B13; 3-58 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (16357535..16359466, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12183257..12185040, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene poils au dos Neighboring gene uncharacterized protein Neighboring gene Mesencephalic astrocyte-derived neurotrophic factor Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene jiangshi Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A widespread family of heat-resistant obscure (Hero) proteins protect against protein instability and aggregation. Tsuboyama K, et al. PLoS Biol, 2020 Mar. PMID 32163402, Free PMC Article
  2. Developmental regulation of canonical and small ORF translation from mRNAs. Patraquim P, et al. Genome Biol, 2020 May 29. PMID 32471506, Free PMC Article
  3. Expression of Mst89B and CG31287 is Needed for Effective Sperm Storage and Egg Fertilization in Drosophila. Grewal G, et al. Cells, 2021 Feb 1. PMID 33535499, Free PMC Article
  4. FlyAtlas 2 in 2022: enhancements to the Drosophila melanogaster expression atlas. Krause SA, et al. Nucleic Acids Res, 2022 Jan 7. PMID 34718735, Free PMC Article
  5. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17931-PA
CG17931-PC
CG17931-PD
CG17931-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    16357535..16359466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300436.1 → NP_001287365.1  uncharacterized protein Dmel_CG17931, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287365.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B8A432, Q9VEW2
    UniProtKB/TrEMBL
    A0A0B4KH85
    Conserved Domains (1) summary
    pfam04419
    Location:1 → 36
    4F5; 4F5 protein family

  2. NM_001275701.1 → NP_001262630.1  uncharacterized protein Dmel_CG17931, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262630.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B8A432, Q9VEW2
    UniProtKB/TrEMBL
    A0A0B4KH85
    Conserved Domains (1) summary
    pfam04419
    Location:1 → 36
    4F5; 4F5 protein family

  3. NM_001316560.1 → NP_001303489.1  uncharacterized protein Dmel_CG17931, isoform E [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B8A432, Q9VEW2
    UniProtKB/TrEMBL
    A0A0B4KH85
    Conserved Domains (1) summary
    pfam04419
    Location:1 → 36
    4F5; 4F5 protein family

  4. NM_169715.2 → NP_732133.1  uncharacterized protein Dmel_CG17931, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732133.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B8A432, Q9VEW2
    UniProtKB/TrEMBL
    A0A0B4KH85
    Conserved Domains (1) summary
    pfam04419
    Location:1 → 36
    4F5; 4F5 protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4KH85 A0A0B4KH85
Q8T435 Q8T435
Q9VEW2.1 Q9VEW2

Gene LinkOut

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