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sspB ClpXP protease specificity enhancing factor [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 916050, updated on 6-Oct-2023

Summary

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Gene symbol
sspB
Gene description
ClpXP protease specificity enhancing factor
Locus tag
ECs_4101
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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Genomic context

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Sequence:
NC_002695.2 (4111643..4112140, complement)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene sialic acid-inducible nan operon repressor Neighboring gene transporter Neighboring gene stringent starvation protein A Neighboring gene 30S ribosomal subunit protein S9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual regulatory pathways of flagellar gene expression by ClpXP protease in enterohaemorrhagic Escherichia coli. Kitagawa R, et al. Microbiology (Reading), 2011 Nov. PMID 21903756
  2. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  3. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  4. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
  5. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ClpXP protease tightly regulates the flagellar expression by degrading the FlhD/FlhC master regulator.
    Title: Dual regulatory pathways of flagellar gene expression by ClpXP protease in enterohaemorrhagic Escherichia coli.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
ClpXP protease specificity enhancing factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    4111643..4112140 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_312128.1 ClpXP protease specificity enhancing factor [Escherichia coli O157:H7 str. Sakai]

    See identical proteins and their annotated locations for NP_312128.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W1EXQ3
    Conserved Domains (1) summary
    COG2969
    Location:2 → 133
    SspB; Stringent starvation protein B, binds SsrA peptide [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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