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yejO autotransporter outer membrane protein [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 916787, updated on 29-Sep-2023

Summary

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Gene symbol
yejO
Gene description
autotransporter outer membrane protein
Locus tag
ECs_3081
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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Genomic context

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Sequence:
NC_002695.2 (3021453..3024044, complement)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene membrane protein Neighboring gene tRNA-Pro Neighboring gene two-component regulatory system response regulator NarP Neighboring gene heme lyase subunit CcmH Neighboring gene thiol:disulfide interchange protein DsbE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  2. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  3. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
  4. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
autotransporter outer membrane protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    3021453..3024044 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_311108.2 autotransporter outer membrane protein [Escherichia coli O157:H7 str. Sakai]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A827Y4B7
    Conserved Domains (3) summary
    COG3468
    Location:27 → 541
    AidA; Type V secretory pathway, adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport]
    cd01343
    Location:302 → 561
    PL1_Passenger_AT; Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases, ...
    TIGR01414
    Location:468 → 863
    autotrans_barl; outer membrane autotransporter barrel domain
Nucleotide Protein
Heading Accession and Version

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